By Berhane K., Thomas D. C.
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Extra resources for A two-stage model for multiple time series data of counts (2002)(en)(12s)
The R code in chunks can be sent to the R console with Ctrl + Enter, just like what we do in a normal R script. In this way, we can run certain R code chunks interactively before we compile a whole document. 1 is a screenshot of how an Rnw document looks in RStudio. For an Rnw document, its final output format is usually PDF (via LATEX). RStudio provides synchronization between the PDF document and the source document, which implies these features: 1. forward search: we can navigate from one line in the source document to an appropriate location in the PDF document that corresponds to the source line; 2.
3. 3: Using knitr in LYX: R code is inserted in a red box using the Rnw syntax; when we click the View button, we will see a PDF document compiled through knitr and LYX. home("bin") After you have made this change, you need to reconfigure LYX by Tools Reconfigure. This is to make sure LYX knows where R is installed so that it can call R and knitr to compile the Rnw document. exe is. If it is not present in PATH, the knitr module will be unavailable. This step is often not needed for Linux and Mac OS because these systems will put the R executable on PATH by default.
4 Editors We can write documents for knitr with any text editor, because these documents are plain text files. For example, lightweight editors like Notepad under Windows or Gedit under Linux will work. The main reasons that we need special text editors are 1. , input <<>>= and @ with a keyboard shortcut instead of typing these characters every time; 2. we wish to call R and knitr to compile source documents to PDF/HTML within an editor instead of opening R and typing the command knitr::knit(), and even better, to send R code chunks to R from within the editor directly.